Detailed information of matrix profile MA1770.1

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Profile summary
Name: MYB40
Matrix ID: MA1770.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 26484765
Uniprot ID: F4K6R6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 397 468 392 388 8 0 595 0 0 0 544 637 481 ]
C [ 97 63 89 0 0 0 0 4 0 4 0 38 127 ]
G [ 262 228 148 578 591 4 0 996 992 0 430 308 350 ]
T [ 245 241 371 34 401 996 405 0 8 996 25 17 42 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1770.1 MA1770 1 MYB40 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1770.2 MA1770 2 MYB40 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: