Detailed information of matrix profile MA1778.1

  1. Home
  2. Matrix > MA1778.1

Profile summary
Name: MYB80
Matrix ID: MA1778.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 26484765
Uniprot ID: Q9XHV0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 407 450 482 708 519 2 0 775 0 0 2 402 538 560 371 ]
C [ 139 168 29 7 8 0 0 5 0 0 0 66 64 136 318 ]
G [ 197 155 195 69 392 371 0 8 1000 771 0 471 297 242 153 ]
T [ 257 227 294 217 81 627 1000 212 0 229 998 62 101 62 158 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1778.1 MA1778 1 MYB80 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1778.2 MA1778 2 MYB80 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: