Detailed information of matrix profile MA1783.1

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Profile summary
Name: NAC005
Matrix ID: MA1783.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: O81914  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 222 361 415 0 0 0 236 125 190 180 320 495 20 998 995 0 63 281 463 ]
C [ 59 78 183 998 0 0 376 149 149 346 210 153 493 0 5 0 158 66 19 ]
G [ 27 92 271 0 3 0 286 93 171 63 115 178 63 2 0 1000 117 20 20 ]
T [ 692 469 131 2 997 1000 102 632 490 412 354 175 424 0 0 0 663 632 498 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1783.1 MA1783 1 NAC005 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: