Detailed information of matrix profile MA1787.1

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Profile summary
Name: NAC047
Matrix ID: MA1787.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q84TD6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 502 603 215 348 107 577 8 5 0 252 238 368 310 372 547 ]
C [ 167 45 97 0 5 152 980 0 0 33 122 165 170 148 70 ]
G [ 137 285 640 0 367 230 10 995 0 708 88 207 258 202 127 ]
T [ 195 67 48 652 522 42 2 0 1000 7 552 260 262 278 257 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1787.1 MA1787 1 NAC047 Arabidopsis thaliana
NAC GCM domain factors
MA1787.2 MA1787 2 NAC047 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: