Detailed information of matrix profile MA1788.1

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Profile summary
Name: NAC054
Matrix ID: MA1788.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9FRV4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 590 123 273 97 392 471 4 0 0 185 145 286 304 335 489 22 1000 700 0 ]
C [ 123 101 137 9 13 106 996 0 0 0 189 101 189 220 115 621 0 300 0 ]
G [ 93 652 419 9 216 379 0 877 0 815 9 278 313 216 163 176 0 0 991 ]
T [ 194 123 172 885 379 44 0 123 1000 0 656 335 194 229 233 181 0 0 9 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1788.1 MA1788 1 NAC054 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: