Detailed information of matrix profile MA1789.1

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Profile summary
Name: NAC071
Matrix ID: MA1789.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: O49697  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 209 505 30 0 0 84 537 449 301 418 350 108 997 862 0 ]
C [ 0 66 968 0 0 146 123 125 135 126 103 338 0 135 0 ]
G [ 84 340 0 367 0 741 190 310 380 227 133 508 3 3 995 ]
T [ 707 89 2 633 1000 29 150 116 184 229 414 45 0 0 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1789.1 MA1789 1 NAC071 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: