Detailed information of matrix profile MA1794.1

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Profile summary
Name: NLP7
Matrix ID: MA1794.1
Class: RWP-RK
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 23511481
Uniprot ID: Q84TH9  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 250 220 72 106 946 909 570 516 0 156 0 807 429 365 326 ]
C [ 281 351 415 323 0 0 22 40 0 339 934 2 183 165 118 ]
G [ 123 123 113 472 15 81 390 444 1000 175 0 182 89 129 109 ]
T [ 346 306 400 99 39 10 18 0 0 329 66 10 299 341 447 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1794.1 MA1794 1 NLP7 Arabidopsis thaliana
RWP-RK
MA1794.2 MA1794 2 NLP7 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: