Detailed information of matrix profile MA1799.1

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Profile summary
Name: SPL10
Matrix ID: MA1799.1
Class: C2H2 zinc finger factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q8S9L0  
Source: 25220462
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 213 246 44 153 10 0 980 3 393 303 ]
C [ 166 101 596 744 9 0 14 962 149 164 ]
G [ 323 163 23 44 971 42 5 0 261 233 ]
T [ 299 490 337 58 10 957 1 34 197 300 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1799.1 MA1799 1 SPL10 Arabidopsis thaliana
SBP C2H2 zinc finger factors
MA1799.2 MA1799 2 SPL10 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: