Detailed information of matrix profile MA1807.1

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Profile summary
Name: ZHD10
Matrix ID: MA1807.1
Class: Homeo domain factors
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21059647
Uniprot ID: Q9FIW9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 371 598 0 0 1000 1000 0 0 972 463 289 ]
C [ 245 138 372 0 0 0 0 172 0 167 160 ]
G [ 160 172 0 0 0 0 0 0 28 64 296 ]
T [ 225 92 628 1000 0 0 1000 828 0 307 255 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1807.1 MA1807 1 ZHD10 Arabidopsis thaliana
PLINC Homeo domain factors
MA1807.2 MA1807 2 ZHD10 Arabidopsis thaliana
PLINC Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: