Detailed information of matrix profile MA1809.1

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Profile summary
Name: GLYMA-07G038400
Matrix ID: MA1809.1
Class: CH3
Family: GRF
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation: 29985961
Uniprot ID: I1KHB3  
Source: GSE152313
Comment:

Sequence logo

Frequency matrix

         
A [ 2069 2150 298 505 232 6019 214 6590 211 2179 1788 ]
C [ 1964 1352 6804 238 167 729 6887 315 6694 1453 1676 ]
G [ 1378 1300 260 127 6779 272 189 162 246 1704 1555 ]
T [ 2122 2731 171 6663 355 513 243 466 382 2197 2514 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1809.1 MA1809 1 GLYMA-07G038400 Glycine max
GRF CH3
MA1809.2 MA1809 2 GLYMA-07G038400 Glycine max
GRF C3H zinc finger factors
     

-log(P-value) = 46.3668

TFFM details

TFFM ID: TFFM0931.1

ChIP-seq Centrality
-log(P-value): 957.611

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0931.1

ChIP-seq Centrality
-log(P-value): 874.826

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: