Detailed information of matrix profile MA1812.1

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Profile summary
Name: ASR1
Matrix ID: MA1812.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: ChIP-seq
Validation: 15101820
Uniprot ID: A0A3Q7EM19  
Source: 24423251
Comment:

Sequence logo

Frequency matrix

         
A [ 53 42 33 124 20 1 0 0 0 149 111 41 69 59 46 ]
C [ 36 34 51 10 1 0 153 156 155 1 6 14 19 21 29 ]
G [ 19 35 24 5 135 155 0 0 0 6 7 7 14 34 26 ]
T [ 48 45 48 17 0 0 3 0 1 0 32 94 54 42 55 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1812.1 MA1812 1 ASR1 Solanum lycopersicum
Myb-related Tryptophan cluster factors
MA1812.2 MA1812 2 ASR1 Solanum lycopersicum
MYB-related Tryptophan cluster factors
     

-log(P-value) = 37.8193

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: