Detailed information of matrix profile MA1815.1

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Profile summary
Name: GRF4
Matrix ID: MA1815.1
Class: CH3
Family: GRF
Collection: CORE
Taxon: Plants
Species: Oryza sativa
Data Type: ChIP-seq
Validation: 24532604
Uniprot ID: Q6ZIK5  
Source: 30111841
Comment:

Sequence logo

Frequency matrix

         
A [ 19 23 7 3 56 2 3 53 2 2 22 19 11 ]
C [ 24 8 1 59 1 1 60 2 3 59 11 8 28 ]
G [ 8 16 54 3 5 61 0 0 59 4 6 24 12 ]
T [ 14 18 3 0 3 1 2 10 1 0 26 14 14 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1815.1 MA1815 1 GRF4 Oryza sativa
GRF CH3
MA1815.2 MA1815 2 GRF4 Oryza sativa
GRF C3H zinc finger factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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