Detailed information of matrix profile MA1816.1

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Profile summary
Name: O11
Matrix ID: MA1816.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: ChIP-seq
Validation: 7742856
Uniprot ID: A0A1D6EAS7  
Source: 29436476
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 1185 1293 964 25 5440 4 3 8 161 1431 1356 1104 ]
C [ 1539 1416 1164 5212 12 5435 15 0 61 1901 1400 1632 ]
G [ 1631 1392 1901 60 0 17 5439 10 5216 1164 1413 1538 ]
T [ 1105 1359 1431 163 8 4 3 5442 22 964 1291 1186 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1816.1 MA1816 1 O11 Zea mays
Basic helix-loop-helix factors (bHLH)
MA1816.2 MA1816 2 O11 Zea mays
bHLH Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 52.6522

TFFM details

TFFM ID: TFFM0936.1

ChIP-seq Centrality
-log(P-value): 1211.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0936.1

ChIP-seq Centrality
-log(P-value): 1303.31

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: