Detailed information of matrix profile MA1830.2

  1. Home
  2. Matrix > MA1830.2

Profile summary
Name: Zm00001d015407
Matrix ID: MA1830.2
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: ChIP-seq
Validation: 24477691
Uniprot ID: A0A060D7H5  
Source: 33037196
Comment:

Sequence logo

Frequency matrix

         
A [ 310 317 352 335 428 32 497 485 19 517 11 39 17 37 107 80 ]
C [ 52 112 77 37 16 13 23 6 7 26 6 16 483 351 91 44 ]
G [ 70 64 56 79 92 477 16 8 17 5 3 20 11 24 24 43 ]
T [ 124 63 71 105 20 34 20 57 513 8 536 481 45 144 334 389 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1830.1 MA1830 1 Zm00001d015407 Zea mays
GARP_G2-like Tryptophan cluster factors
MA1830.2 MA1830 2 Zm00001d015407 Zea mays
GARP_G2-like Tryptophan cluster factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: