Detailed information of matrix profile MA1911.2

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Profile summary
Name: Rel
Matrix ID: MA1911.2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32647255
Uniprot ID: Q4H2V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 130 217 547 956 789 98 43 35 9 189 ]
C [ 139 46 38 8 15 22 118 845 977 556 ]
G [ 629 669 323 22 11 21 7 6 6 184 ]
T [ 103 69 92 14 185 859 832 115 8 71 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1911.1 MA1911 1 Rel Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
MA1911.2 MA1911 2 Rel Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: