Detailed information of matrix profile MA1938.2

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Profile summary
Name: ERF::NHLH1
Matrix ID: MA1938.2
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9488464
Uniprot ID: P50548   Q02575  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 210 40 84 12 26 7 1 8 15 324 8 28 0 18 21 7 ]
C [ 16 176 11 3 313 325 11 6 317 13 2 288 0 14 290 81 ]
G [ 108 3 0 21 10 0 327 316 12 20 301 11 0 317 14 81 ]
T [ 0 113 241 324 4 27 12 0 1 10 26 1 324 5 0 156 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1938.1 MA1938 1 ERF::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
MA1938.2 MA1938 2 ERF::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: