Detailed information of matrix profile MA1939.2

  1. Home
  2. Matrix > MA1939.2

Profile summary
Name: ERF::SREBF2
Matrix ID: MA1939.2
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23050235
Uniprot ID: P50548   Q12772  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 246 50 10 373 5 15 1 12 352 1 73 31 14 0 34 17 ]
C [ 8 24 373 8 373 5 4 7 13 146 0 0 373 373 1 162 ]
G [ 111 0 0 10 96 373 2 373 4 0 61 7 15 7 373 211 ]
T [ 7 299 0 30 0 0 373 37 4 227 373 373 2 5 58 93 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1939.1 MA1939 1 ERF::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
MA1939.2 MA1939 2 ERF::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: