Detailed information of matrix profile MA1943.1

  1. Home
  2. Matrix > MA1943.1

Profile summary
Name: ETV2::HOXB13
Matrix ID: MA1943.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: Q3KNT2   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 810 442 326 2611 4791 76 2164 25 2050 0 0 3 6 284 573 ]
C [ 624 312 16 231 0 1344 47 1003 14 12 4791 4791 42 838 953 ]
G [ 1879 773 49 166 270 70 2627 1649 804 13 0 0 4791 4791 720 ]
T [ 1478 4791 4791 4791 8 4791 722 2114 4791 4791 0 0 599 725 2545 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1943.1 MA1943 1 ETV2::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
MA1943.2 MA1943 2 ETV2::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: