Detailed information of matrix profile MA1951.1

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Profile summary
Name: FOS
Matrix ID: MA1951.1
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2511004
Uniprot ID: P01100  
Source: 26550823
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 226 262 1519 3 39 1672 10 50 24 110 1671 19 253 847 ]
C [ 460 364 77 10 38 14 1663 2 0 1634 0 345 1515 73 ]
G [ 466 1283 517 16 1647 35 2 1666 29 22 18 49 152 805 ]
T [ 525 394 33 1675 60 4 80 14 1669 30 0 1549 145 51 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1951.1 MA1951 1 FOS Homo sapiens
Fos-related Basic leucine zipper factors (bZIP)
MA1951.2 MA1951 2 FOS Homo sapiens
Fos-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0940.1

ChIP-seq Centrality
-log(P-value): 5031.98

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0940.1

ChIP-seq Centrality
-log(P-value): 5060.28

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: