Detailed information of matrix profile MA1958.1

  1. Home
  2. Matrix > MA1958.1

Profile summary
Name: HOXD12::ELK1
Matrix ID: MA1958.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   P35452  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 121 27 0 75 487 0 127 487 0 29 0 8 0 5 30 61 92 ]
C [ 96 3 5 5 7 487 5 0 487 0 0 487 487 34 247 257 182 ]
G [ 80 59 0 10 0 0 303 0 3 2 1 0 0 487 240 77 78 ]
T [ 190 487 487 487 0 54 52 7 17 487 487 0 3 95 148 230 135 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1958.1 MA1958 1 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
MA1958.2 MA1958 2 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: