Detailed information of matrix profile MA1958.2

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Profile summary
Name: HOXD12::ELK1
Matrix ID: MA1958.2
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   P35452  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 27 0 75 487 0 127 487 0 29 0 8 0 5 ]
C [ 3 5 5 7 487 5 0 487 0 0 487 487 34 ]
G [ 59 0 10 0 0 303 0 3 2 1 0 0 487 ]
T [ 487 487 487 0 54 52 7 17 487 487 0 3 95 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1958.1 MA1958 1 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
MA1958.2 MA1958 2 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: