Detailed information of matrix profile MA1960.2

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Profile summary
Name: MGA::EVX1
Matrix ID: MA1960.2
Class: T-Box factors::Homeo domain factors
Family: TBX6-related factors::HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P49640   Q8IWI9  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 897 2290 95 54 2290 1078 0 2290 74 127 615 ]
C [ 1393 19 74 5 83 219 2290 25 2290 2290 1471 ]
G [ 152 41 69 0 64 159 21 45 23 73 140 ]
T [ 14 90 2290 2290 22 833 3 104 27 607 2290 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1960.1 MA1960 1 MGA::EVX1 Homo sapiens
TBX6-related factors::HOX T-Box factors::Homeo domain factors
MA1960.2 MA1960 2 MGA::EVX1 Homo sapiens
TBX6-related factors::HOX T-Box factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: