Detailed information of matrix profile MA1963.1

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Profile summary
Name: SATB1
Matrix ID: MA1963.1
Class: Homeo domain factors
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation: 18187506
Uniprot ID: Q01826  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 11611 11209 11402 262 492 33670 32708 288 32009 30660 8716 12175 13173 ]
C [ 4807 4284 5320 33122 195 164 115 128 485 881 13196 4803 4715 ]
G [ 4675 5143 7922 140 37 221 120 123 889 1071 2582 3786 5595 ]
T [ 13131 13588 9580 700 33500 169 1281 33685 841 1612 9730 13460 10741 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1963.1 MA1963 1 SATB1 Homo sapiens
HD-CUT Homeo domain factors
MA1963.2 MA1963 2 SATB1 Homo sapiens
HD-CUT Homeo domain factors
     

-log(P-value) = 18252.7

TFFM details

TFFM ID: TFFM0942.1

ChIP-seq Centrality
-log(P-value): 13190.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0942.1

ChIP-seq Centrality
-log(P-value): 12916.1

TFFM detailed summary logos

Description:

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GC Content: