Detailed information of matrix profile MA1964.1

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Profile summary
Name: SMAD2
Matrix ID: MA1964.1
Class: SMAD/NF-1 DNA-binding domain factors
Family: SMAD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation: 21828274
Uniprot ID: Q15796  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 753 775 0 11 18 8 97 20 774 1020 ]
C [ 1288 1009 0 0 3703 154 171 86 1370 915 ]
G [ 1066 599 3757 0 30 149 3484 3610 1100 998 ]
T [ 651 1375 1 3747 7 3447 6 42 514 825 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1964.1 MA1964 1 SMAD2 Homo sapiens
SMAD factors SMAD/NF-1 DNA-binding domain factors
MA1964.2 MA1964 2 SMAD2 Homo sapiens
SMAD factors SMAD/NF-1 DNA-binding domain factors
     

-log(P-value) = 152.506

TFFM details

TFFM ID: TFFM0943.1

ChIP-seq Centrality
-log(P-value): 861.959

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0943.1

ChIP-seq Centrality
-log(P-value): 883.064

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: