Detailed information of matrix profile MA1966.1

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Profile summary
Name: TFAP4::ETV1
Matrix ID: MA1966.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: bHLH-ZIP::Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P50549   Q01664  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 808 698 88 2925 107 491 99 117 39 1346 71 64 32 101 176 436 ]
C [ 960 1315 2925 188 1482 2925 323 16 1821 145 124 2925 2925 183 1384 1517 ]
G [ 637 371 23 316 1443 572 63 2925 359 82 59 51 22 2925 1541 281 ]
T [ 521 541 17 127 722 80 2925 20 706 2925 2925 41 34 498 310 1408 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1966.1 MA1966 1 TFAP4::ETV1 Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
MA1966.2 MA1966 2 TFAP4::ETV1 Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: