Detailed information of matrix profile MA1990.1

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Profile summary
Name: Gli1
Matrix ID: MA1990.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 25476449
Uniprot ID: P47806  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 615 443 252 174 68 63 190 49 71 54 162 476 738 869 ]
C [ 1401 1534 251 110 145 75 87 74 88 498 3535 1104 1115 943 ]
G [ 896 1438 188 3566 3231 3827 73 3809 3744 331 193 299 1093 1170 ]
T [ 1091 588 3312 153 559 38 3653 71 100 3120 113 2124 1057 1021 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1990.1 MA1990 1 Gli1 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1990.2 MA1990 2 Gli1 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0957.1

ChIP-seq Centrality
-log(P-value): 667.189

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0957.1

ChIP-seq Centrality
-log(P-value): 655.376

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: