Detailed information of matrix profile MA1991.1

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Profile summary
Name: Hnf1A
Matrix ID: MA1991.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 30420627
Uniprot ID: P22361  
Source: ReMap
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 342 364 784 98 1092 73 68 1210 1122 1193 62 198 338 379 ]
C [ 351 349 99 377 31 16 1033 12 60 7 39 204 386 319 ]
G [ 305 356 210 689 21 35 118 11 51 30 1130 744 348 316 ]
T [ 251 180 156 85 105 1125 30 16 16 19 18 103 177 235 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1991.1 MA1991 1 Hnf1A Mus musculus
POU domain factors Homeo domain factors
MA1991.2 MA1991 2 Hnf1A Mus musculus
POU domain factors Homeo domain factors
     

-log(P-value) = 6.20245

TFFM details

TFFM ID: TFFM0958.1

ChIP-seq Centrality
-log(P-value): 5386.26

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0958.1

ChIP-seq Centrality
-log(P-value): 6017.79

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: