Detailed information of matrix profile MA1995.1

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Profile summary
Name: Npas4
Matrix ID: MA1995.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 31585079
Uniprot ID: Q8BGD7  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2548 2359 540 334 515 124 56 7460 404 2441 1961 ]
C [ 2273 2197 492 7713 350 106 184 622 7292 1689 2516 ]
G [ 2240 2358 702 580 7969 251 8602 367 647 1553 2481 ]
T [ 1899 2046 7226 333 126 8479 118 511 617 3277 2002 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1995.1 MA1995 1 Npas4 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
MA1995.2 MA1995 2 Npas4 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 0.236016

TFFM details

TFFM ID: TFFM0962.1

ChIP-seq Centrality
-log(P-value): 1522.86

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0962.1

ChIP-seq Centrality
-log(P-value): 0.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: