Detailed information of matrix profile MA1996.1

  1. Home
  2. Matrix > MA1996.1

Profile summary
Name: Nr1H2
Matrix ID: MA1996.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 31175293
Uniprot ID:  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1886 2601 4028 8549 88 91 61 147 8642 1648 2480 ]
C [ 2733 2091 1340 191 171 36 35 8483 51 2757 2069 ]
G [ 2014 1858 2796 132 8521 8740 41 72 241 2224 2255 ]
T [ 2338 2421 807 99 191 104 8834 269 37 2342 2167 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1996.1 MA1996 1 Nr1H2 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1996.2 MA1996 2 Nr1H2 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 59.7438

TFFM details

TFFM ID: TFFM0963.1

ChIP-seq Centrality
-log(P-value): 2755.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0963.1

ChIP-seq Centrality
-log(P-value): 2461.52

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: