Detailed information of matrix profile MA2005.2

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Profile summary
Name: NAC016
Matrix ID: MA2005.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: A4FVP6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 0 32 199 427 149 402 420 5 1000 534 3 92 595 ]
C [ 998 0 0 0 312 134 152 271 146 874 0 466 0 337 211 ]
G [ 0 437 0 968 303 256 472 218 201 85 0 0 966 273 2 ]
T [ 2 563 1000 0 186 183 226 109 233 35 0 0 30 298 193 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2005.1 MA2005 1 NAC016 Arabidopsis thaliana
NAC GCM domain factors
MA2005.2 MA2005 2 NAC016 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: