Detailed information of matrix profile MA2007.1

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Profile summary
Name: MYB107
Matrix ID: MA2007.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9628022
Uniprot ID: Q9LDI5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 116 89 57 564 32 7 473 571 454 23 227 178 224 ]
C [ 151 192 441 1 532 563 12 7 106 525 133 155 115 ]
G [ 97 43 25 7 3 3 3 1 8 5 42 60 85 ]
T [ 216 256 57 8 13 7 92 1 12 27 178 187 156 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2007.1 MA2007 1 MYB107 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2007.2 MA2007 2 MYB107 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0968.1

ChIP-seq Centrality
-log(P-value): 1052.05

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0968.1

ChIP-seq Centrality
-log(P-value): 1258.76

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: