Detailed information of matrix profile MA2008.1

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Profile summary
Name: MYB99
Matrix ID: MA2008.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 26484765
Uniprot ID: Q9SNW9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 154 168 0 987 0 0 1 1020 535 140 ]
C [ 332 312 1023 1 1004 1022 0 3 372 471 ]
G [ 106 90 0 26 11 1 12 0 32 35 ]
T [ 431 453 0 9 8 0 1010 0 84 377 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2008.1 MA2008 1 MYB99 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2008.2 MA2008 2 MYB99 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0969.1

ChIP-seq Centrality
-log(P-value): 1819.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0969.1

ChIP-seq Centrality
-log(P-value): 1642.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: