Detailed information of matrix profile MA2020.1

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Profile summary
Name: HSFB4
Matrix ID: MA2020.1
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9C635  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 16 11 26 0 89 86 59 1 1 3 6 9 ]
C [ 40 30 0 0 0 0 4 83 1 4 64 25 ]
G [ 8 6 62 89 0 1 16 3 1 1 4 11 ]
T [ 25 42 1 0 0 2 10 2 86 81 15 44 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2020.1 MA2020 1 HSFB4 Arabidopsis thaliana
Heat shock factors
MA2020.2 MA2020 2 HSFB4 Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 123.557

TFFM details

TFFM ID: TFFM0979.1

ChIP-seq Centrality
-log(P-value): 196.643

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0979.1

ChIP-seq Centrality
-log(P-value): 211.973

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: