Detailed information of matrix profile MA2022.1

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Profile summary
Name: LOB
Matrix ID: MA2022.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 17913740
Uniprot ID: Q9FML4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 167 140 178 261 113 101 103 50 24 27 16 23 24 18 133 86 103 ]
C [ 87 96 373 56 71 532 44 38 733 8 7 729 4 10 552 24 74 ]
G [ 382 463 74 331 538 33 398 693 1 721 768 4 739 760 18 569 553 ]
T [ 159 96 170 147 73 129 250 14 37 39 4 39 28 7 92 116 65 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2022.1 MA2022 1 LOB Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
MA2022.2 MA2022 2 LOB Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     

-log(P-value) = 112.37

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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