Detailed information of matrix profile MA2028.1

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Profile summary
Name: MYB49
Matrix ID: MA2028.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26484765
Uniprot ID: Q9SPG6  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 49 37 15 11 182 7 1 12 188 164 12 29 82 56 51 ]
C [ 33 46 32 43 1 175 187 2 0 18 142 12 29 35 44 ]
G [ 51 25 9 17 1 2 0 1 0 1 4 5 10 28 30 ]
T [ 55 80 132 117 4 4 0 173 0 5 30 142 67 69 63 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2028.1 MA2028 1 MYB49 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2028.2 MA2028 2 MYB49 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 131.826

TFFM details

TFFM ID: TFFM0982.1

ChIP-seq Centrality
-log(P-value): 388.043

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0982.1

ChIP-seq Centrality
-log(P-value): 396.163

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: