Detailed information of matrix profile MA2029.1

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Profile summary
Name: MYB88
Matrix ID: MA2029.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26484765
Uniprot ID: F4IRB4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 40 37 17 141 13 0 139 0 1 0 0 31 38 ]
C [ 37 21 6 3 3 2 27 1 165 6 3 36 16 ]
G [ 42 72 138 6 152 165 1 167 1 159 15 68 54 ]
T [ 49 38 7 18 0 1 1 0 1 3 150 33 60 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2029.1 MA2029 1 MYB88 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2029.2 MA2029 2 MYB88 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 139.442

TFFM details

TFFM ID: TFFM0983.1

ChIP-seq Centrality
-log(P-value): 267.366

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0983.1

ChIP-seq Centrality
-log(P-value): 302.803

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: