Detailed information of matrix profile MA2032.1

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Profile summary
Name: TRB1
Matrix ID: MA2032.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26597966
Uniprot ID: Q8VWK4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1682 439 41 4734 50 66 64 105 104 854 1126 ]
C [ 474 1303 44 57 55 36 35 443 96 682 1087 ]
G [ 1073 372 34 44 4767 4755 4706 40 128 451 1082 ]
T [ 1714 2829 4824 108 71 86 138 4355 4615 2956 1648 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2032.1 MA2032 1 TRB1 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
MA2032.2 MA2032 2 TRB1 Arabidopsis thaliana
MYB-related Tryptophan cluster factors
     

-log(P-value) = 1549.28

TFFM details

TFFM ID: TFFM0985.1

ChIP-seq Centrality
-log(P-value): 6066.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0985.1

ChIP-seq Centrality
-log(P-value): 5979.36

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: