Detailed information of matrix profile MA2039.1

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Profile summary
Name: ASIL2
Matrix ID: MA2039.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497
Uniprot ID: Q9LJG8  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 369 335 174 40 134 31 1 2 6 1168 244 682 470 ]
C [ 449 252 228 1217 7 1244 1382 0 14 147 33 210 281 ]
G [ 188 419 144 59 1233 61 2 1391 1367 10 1089 210 168 ]
T [ 393 393 853 83 25 63 14 6 12 74 33 297 480 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2039.1 MA2039 1 ASIL2 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA2039.2 MA2039 2 ASIL2 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0986.1

ChIP-seq Centrality
-log(P-value): 463.064

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0986.1

ChIP-seq Centrality
-log(P-value): 459.751

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: