Detailed information of matrix profile MA2042.1

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Profile summary
Name: MYB58
Matrix ID: MA2042.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26484765
Uniprot ID: Q9SA47  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 563 406 335 294 163 35 1500 163 9 1374 1440 209 91 466 355 529 498 ]
C [ 303 402 590 310 861 1368 8 1361 1520 21 59 1291 1185 688 798 352 411 ]
G [ 205 311 202 165 98 14 21 12 7 23 30 11 35 138 105 213 234 ]
T [ 480 432 424 782 429 134 22 15 15 133 22 40 240 259 293 457 408 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2042.1 MA2042 1 MYB58 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2042.2 MA2042 2 MYB58 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0988.1

ChIP-seq Centrality
-log(P-value): 1546.97

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0988.1

ChIP-seq Centrality
-log(P-value): 1488.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: