Detailed information of matrix profile MA2043.1

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Profile summary
Name: NAC004
Matrix ID: MA2043.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: O81913  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 279 422 0 898 874 0 648 842 858 173 256 ]
C [ 229 120 918 1 28 2 38 14 29 348 259 ]
G [ 129 250 1 19 1 912 16 2 2 171 179 ]
T [ 288 133 6 7 22 11 223 67 36 233 231 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2043.1 MA2043 1 NAC004 Arabidopsis thaliana
NAC GCM domain factors
MA2043.2 MA2043 2 NAC004 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 314.519

TFFM details

TFFM ID: TFFM0989.1

ChIP-seq Centrality
-log(P-value): 1382.02

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0989.1

ChIP-seq Centrality
-log(P-value): 1335.55

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: