Detailed information of matrix profile MA2044.1

  1. Home
  2. Matrix > MA2044.1

Profile summary
Name: NAC007
Matrix ID: MA2044.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 20935069
Uniprot ID: Q9FWX2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 443 594 78 99 124 18 39 24 291 611 710 ]
C [ 437 413 13 40 9 2144 11 19 361 473 325 ]
G [ 686 624 15 60 2037 7 161 13 1236 368 525 ]
T [ 607 542 2067 1974 3 4 1962 2117 285 721 613 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2044.1 MA2044 1 NAC007 Arabidopsis thaliana
NAC GCM domain factors
MA2044.2 MA2044 2 NAC007 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0990.1

ChIP-seq Centrality
-log(P-value): 2682.99

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0990.1

ChIP-seq Centrality
-log(P-value): 2767.88

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: