Detailed information of matrix profile MA2046.1

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Profile summary
Name: NAC035
Matrix ID: MA2046.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 22345491
Uniprot ID: Q9ZVP8  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 259 246 221 25 41 94 8 10 6 104 161 185 250 251 ]
C [ 226 112 104 29 7 649 787 24 3 36 112 156 185 148 ]
G [ 133 274 253 4 720 29 8 736 4 632 109 143 187 184 ]
T [ 195 181 235 755 45 41 10 43 800 41 431 329 191 230 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2046.1 MA2046 1 NAC035 Arabidopsis thaliana
NAC GCM domain factors
MA2046.2 MA2046 2 NAC035 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0992.1

ChIP-seq Centrality
-log(P-value): 1909.04

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0992.1

ChIP-seq Centrality
-log(P-value): 1923.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: