Detailed information of matrix profile MA2048.1

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Profile summary
Name: NAC045
Matrix ID: MA2048.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: A4VCM0  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 380 539 250 197 39 48 121 16 9 6 111 376 342 ]
C [ 250 263 172 142 10 11 41 1354 16 5 814 304 263 ]
G [ 330 238 695 917 3 17 1158 11 52 4 367 193 353 ]
T [ 444 364 287 148 1352 1328 84 23 1327 1389 112 531 446 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2048.1 MA2048 1 NAC045 Arabidopsis thaliana
NAC GCM domain factors
MA2048.2 MA2048 2 NAC045 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0994.1

ChIP-seq Centrality
-log(P-value): 3083.08

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0994.1

ChIP-seq Centrality
-log(P-value): 2929.37

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: