Detailed information of matrix profile MA2049.1

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Profile summary
Name: NAC053
Matrix ID: MA2049.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: Q949N0  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1157 1383 2 3873 3762 1 3241 3640 3814 819 1125 1168 ]
C [ 1073 799 3931 8 161 2 134 56 31 1483 1249 634 ]
G [ 639 960 2 38 8 3927 50 17 21 640 687 812 ]
T [ 1093 820 27 43 31 32 537 249 96 1020 901 1348 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2049.1 MA2049 1 NAC053 Arabidopsis thaliana
NAC GCM domain factors
MA2049.2 MA2049 2 NAC053 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0995.1

ChIP-seq Centrality
-log(P-value): 5175.95

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0995.1

ChIP-seq Centrality
-log(P-value): 5256.55

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: