Detailed information of matrix profile MA2050.1

  1. Home
  2. Matrix > MA2050.1

Profile summary
Name: NAC101
Matrix ID: MA2050.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: Q9LVA1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 944 568 1013 108 102 192 44 36 28 333 584 863 739 ]
C [ 465 562 405 14 42 57 2538 7 17 253 941 374 460 ]
G [ 453 813 644 14 56 2318 35 145 11 1815 409 628 554 ]
T [ 787 706 587 2513 2449 82 32 2461 2593 248 715 784 896 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2050.1 MA2050 1 NAC101 Arabidopsis thaliana
NAC GCM domain factors
MA2050.2 MA2050 2 NAC101 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 1569.31

TFFM details

TFFM ID: TFFM0996.1

ChIP-seq Centrality
-log(P-value): 3272.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0996.1

ChIP-seq Centrality
-log(P-value): 3220.83

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: