Detailed information of matrix profile MA2052.1

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Profile summary
Name: ZAT6
Matrix ID: MA2052.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24834923
Uniprot ID: O22533  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3205 2318 1077 8080 8084 182 317 8247 575 647 2681 2958 ]
C [ 1611 1824 5912 213 173 82 7885 45 164 310 1459 1391 ]
G [ 1165 1175 410 77 37 56 40 82 170 393 1840 1418 ]
T [ 2603 3267 1185 214 290 8264 342 210 7675 7234 2604 2817 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2052.1 MA2052 1 ZAT6 Arabidopsis thaliana
C2H2 zinc finger factors
MA2052.2 MA2052 2 ZAT6 Arabidopsis thaliana
C2H2 C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0998.1

ChIP-seq Centrality
-log(P-value): 2350.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0998.1

ChIP-seq Centrality
-log(P-value): 2218.86

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: