Detailed information of matrix profile MA2053.1

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Profile summary
Name: NAC105
Matrix ID: MA2053.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: Q9FH59  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 333 389 128 1178 1122 9 73 1136 1172 107 239 331 390 ]
C [ 313 209 680 10 69 12 990 20 4 825 699 180 297 ]
G [ 166 257 214 5 3 1176 37 14 2 87 108 205 186 ]
T [ 389 346 179 8 7 4 101 31 23 182 155 485 328 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2053.1 MA2053 1 NAC105 Arabidopsis thaliana
NAC GCM domain factors
MA2053.2 MA2053 2 NAC105 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0999.1

ChIP-seq Centrality
-log(P-value): 1855.76

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0999.1

ChIP-seq Centrality
-log(P-value): 1798.66

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: