Detailed information of matrix profile MA2104.1

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Profile summary
Name: IDD11
Matrix ID: MA2104.1
Class: C2H2 zinc finger factors
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q9LRW7  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 171 21 5 0 0 0 3 34 5 147 150 236 ]
C [ 77 63 24 0 0 0 990 75 41 142 2 72 ]
G [ 70 31 12 0 1000 9 0 682 39 70 2 12 ]
T [ 682 885 959 1000 0 991 7 209 915 641 846 680 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2104.1 MA2104 1 IDD11 Arabidopsis thaliana
IDD C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: