Detailed information of matrix profile MA2111.1

Profile summary

Name: HNF4
Matrix ID: MA2111.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 12743820
Uniprot ID: Q4H3D5  
Source: 31267468
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

A [ 432 82 90 131 69 899 893 923 9 11 26 19 842 561 ]
C [ 62 66 81 384 815 29 25 10 7 12 740 959 18 192 ]
G [ 454 796 374 126 57 39 58 58 976 167 19 8 117 81 ]
T [ 53 56 454 358 59 32 24 9 8 811 214 15 23 167 ]

Binding sites information

No Binding sites available for this model.

External links