Detailed information of matrix profile MA2128.1

  1. Home
  2. Matrix > MA2128.1

Profile summary
Name: ceh-18
Matrix ID: MA2128.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 24516681
Uniprot ID: P41934  
Source: 25905672
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 768 395 0 999 45 72 26 905 ]
C [ 39 27 0 0 0 0 871 32 ]
G [ 77 27 0 0 45 738 0 32 ]
T [ 116 552 999 0 911 191 103 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2128.1 MA2128 1 ceh-18 Caenorhabditis elegans
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: